BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034B03LP1|AL429853
(866 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 504 e-142
>3x_Contig1682
Length = 16889
Score = 504 bits (254), Expect = e-142
Identities = 702/850 (82%), Gaps = 1/850 (0%)
Strand = Plus / Plus
Query: 10 aagatgtgaggggatgtgatttttggatggaattttgtagaatgaaatagtatagaaatt 69
||||| ||||| |||| |||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 7 aagatctgaggccatgtcatttttcgatggaattttctagaatgaaatagtatacaaatt 66
Query: 70 tttgggtggagaaagtgaaaaagtgttgagatagtggagtggagggaaagaggatggaga 129
||| | | ||||||||||||||||||||| ||| || | |||||| |||||||||||| |
Sbjct: 67 tttcgctcgagaaagtgaaaaagtgttgacatactgcactggaggcaaagaggatggaca 126
Query: 130 aagtaagagtggaatagaattatataaaaagagagagattgagtgaagtttgaaagaatg 189
|||||| | ||||||||||||||||||||||||| ||||| |||||| ||||||||||||
Sbjct: 127 aagtaacactggaatagaattatataaaaagagacagattcagtgaactttgaaagaatg 186
Query: 190 tttgttggaaggttatggttagtagtttgttgaattaatagggaattagtttagtaagtg 249
||| |||||||||||| |||| || ||| || |||||||| |||||||||||||||||
Sbjct: 187 tttcttggaaggttatcgttactactttcttcaattaatacccaattagtttagtaagtg 246
Query: 250 atatatatttgtgattttgtgaatttgagaaaattgagagggtagttagttagttaggat 309
|||||||||||| ||||| | ||||| |||||||||||| | ||||||||||||||||||
Sbjct: 247 atatatatttgtcattttctcaatttcagaaaattgagacgctagttagttagttaggat 306
Query: 310 tgatttagaaaggataatattatagtggtaatttggtaaaggatgtatgttggattatat 369
||||||| |||||||||||||||| | |||||| |||| || ||| || |||||||
Sbjct: 307 tgatttacaaaggataatattatactcctaatttcctaaaccatctatcttccattatat 366
Query: 370 gtgtattgtgttgtgaatatgttttataaagttttaaaaagttaagaagagttgaattaa 429
| |||| |||| ||||||| ||||||||||||||||||| ||||||||| || ||||||
Sbjct: 367 ctctattctgttctgaatatcttttataaagttttaaaaacttaagaagacttcaattaa 426
Query: 430 ttttagaggaaaggggagattatgaaataagatagaaaggaaattataatgtgtaagggt 489
||||| |||||| | ||||| |||||| ||| ||| ||||||||||||| ||||| |
Sbjct: 427 ttttacaggaaaccccacattatcaaataacatacaaacgaaattataatgtctaaggct 486
Query: 490 gttggtattgatttgggtaggagttagtgatgtgttggtgagttttgtaaggagggtgt- 548
||||||||||||||||||| | ||| | |||||||| | | |||| ||| || ||||
Sbjct: 487 gttggtattgatttgggtaccacttactcatgtgttgctcacttttctaacgaccgtgtc 546
Query: 549 gaaattttgggtaaggaggaaggtaagagaagtaggggatgttttgtgggtttgagggag 608
|||||||||| ||| || ||||||| |||| || || |||||| | ||| | ||
Sbjct: 547 gaaattttggctaacgaccaaggtaacagaactaccccatcttttgtcgctttcaccgac 606
Query: 609 agtgaaagattgattggtgatggtgggaagaaggaaggtggtatgaagggagggaagagt 668
| |||||||||||||||||||| || ||||| ||| || |||||| || || | |
Sbjct: 607 actgaaagattgattggtgatgctgccaagaaccaagctgctatgaacccagccaacact 666
Query: 669 gttttggatggtaagggtttgattggtagaaagttgagtgagggagaagttgaaggtgat 728
||||| |||| |||| |||||||||||||||| || ||||| | ||||||| ||||||||
Sbjct: 667 gttttcgatgctaagcgtttgattggtagaaacttcagtgacgcagaagttcaaggtgat 726
Query: 729 atgaaggagttgggattgaaggtgattgaggttggtggtaagggagaagtggaagtggaa 788
|| ||| | || ||| ||||| ||||| |||| ||||||| | |||| ||||| |||
Sbjct: 727 atcaagcacttcccattcaaggtcattgacgttgctggtaagccacaagtcgaagtcgaa 786
Query: 789 tagaagggtgaaaagaaggttttgaggggagaagaaatgtggtgtatgattttgagttag 848
|| ||||||||||| |||||||| | ||||||||| | | ||||||||||||| ||
Sbjct: 787 tacaagggtgaaaacaaggttttcaccccagaagaaatctcctctatgattttgagtaag 846
Query: 849 atgaaggaaa 858
||||||||||
Sbjct: 847 atgaaggaaa 856
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8105
Number of Sequences: 1807
Number of extensions: 8105
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 866
length of database: 10,358,551
effective HSP length: 16
effective length of query: 850
effective length of database: 10,329,639
effective search space: 8780193150
effective search space used: 8780193150
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)